Publications

When results and information about the project are published, we will add them here. Sign up to our mailing list for updates!

OpenVariant: a toolkit to parse and operate multiple input file formats

David Martínez-Millán, Federica Brando, Miguel L. Grau, Mònica Sánchez-Guixé, Carlos López-Elorduy, Iker Reyes-Salazar, Jordi Deu-Pons, Núria López-Bigas, Abel González-Pérez

Bioinformatics, Volume 40, Issue 12, December 2024

Five latent factors underlie response to immunotherapy

Usset, J., Rosendahl Huber, A., Andrianova, M.A. et al.

Nat Genet 56, 2112–2120 (2024)

Oncodrive3D: Fast and accurate detection of structural clusters of somatic mutations under positive selection

Stefano Pellegrini, Olivia Dove Estrella, Ferran Muiños, Nuria Lopez-Bigas, Abel Gonzalez-Perez

bioRxiv 2025.01.11.632354

Identification of clonal hematopoiesis driver mutations through in silico saturation mutagenesis

Demajo, S; Ramis-Zaldivar, J; Muiños, F; Grau, M; Andrianova, M; López-Bigas, N; González-Pérez, A

Cancer Discovery 14 (9) 1717–1731 (2024)

In silico saturation mutagenesis of cancer genes

Muiños F; Martínez-Jiménez F; Pich O; Gonzalez-Perez A; Lopez-Bigas N

Nature 596 (7872 ) 428 – + (2021)

A compendium of mutational cancer driver genes

Martínez-Jiménez F; Muiños F; Sentís I; Deu-Pons J; Reyes-Salazar I; Arnedo-Pac C; Mularoni L; Pich O; Bonet J; Kranas H; Gonzalez-Perez A; Lopez-Bigas N

Nature Reviews Cancer 20 (10 ) 555 – 572 (2020)

Cancer Genome Interpreter annotates the biological and clinical relevance of tumor alterations

Tamborero D; Rubio-Perez C; Deu-Pons J; Schroeder M; Vivancos A; Rovira A; Tusquets I; Albanell J; Rodon J; Tabernero J; de Torres C; Dienstmann R; Gonzalez-Perez A; Lopez-Bigas N

Genome Medicine 10 (25 ) 25 – (2018)

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